STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH8AlkB homolog 8, tRNA methyltransferase. (823 aa)    
Predicted Functional Partners:
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.782
BAALC
BAALC binder of MAP3K1 and KLF4.
      
 0.731
ELP3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
      
 0.621
ENSAPLP00000028760
Uncharacterized protein.
      
 0.609
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.602
ENSAPLP00000030449
uDENN domain-containing protein.
      
 0.558
ZMIZ1
Zinc finger MIZ-type containing 1.
      
 0.545
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.497
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
  
 0.494
ENSAPLP00000020279
Zn-ribbon_14 domain-containing protein.
      
 0.469
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.