STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTCFCCCTC-binding factor. (739 aa)    
Predicted Functional Partners:
RAD21
RAD21 cohesin complex component.
   
 0.929
STAG2
Stromal antigen 2.
   
 0.920
SMC3
Structural maintenance of chromosomes protein.
   
 0.809
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.788
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.707
TOP2B
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.661
TAF3
TATA-box binding protein associated factor 3.
    
 
 0.641
U3J9X0_ANAPP
SCD domain-containing protein.
   
 0.634
ENSAPLP00000020261
SCD domain-containing protein.
   
 0.634
WAPL
WAPL cohesin release factor.
   
  
 0.632
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.