STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPXNLeupaxin. (385 aa)    
Predicted Functional Partners:
PXN-2
Uncharacterized protein.
 
    
 0.936
VCL
Vinculin.
   
 0.850
BCAR1
BCAR1 scaffold protein, Cas family member.
    
 0.738
CRK
CRK proto-oncogene, adaptor protein.
    
 0.683
PARVA
Parvin alpha.
   
 0.662
PARVB
Uncharacterized protein.
   
 0.662
U3IPQ3_ANAPP
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.640
ENSAPLP00000016714
FERM_N_2 domain-containing protein.
    
 0.640
PTK2
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.640
ENSAPLP00000031678
Focal_AT domain-containing protein.
    
 0.640
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.