STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF8C1q and TNF related 8. (290 aa)    
Predicted Functional Partners:
DUSP28
Uncharacterized protein.
   
  
 0.749
MYCBPAP
MYCBP associated protein.
      
 0.635
PTPRE
Protein tyrosine phosphatase receptor type E.
   
  
 0.615
CEP97
Centrosomal protein 97.
   
  
 0.611
CEP89
Centrosomal protein 89.
      
 0.611
MYLK3
Myosin light chain kinase 3.
      
 0.611
CEP162
Centrosomal protein 162.
      
 0.611
U3IAG1_ANAPP
Uncharacterized protein.
      
 0.594
ENSAPLP00000022042
Uncharacterized protein.
      
 0.594
PTPRF
Protein tyrosine phosphatase receptor type F.
   
  
 0.541
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.