STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRAC1Chromatin accessibility complex subunit 1. (137 aa)    
Predicted Functional Partners:
POLE3
CBFD_NFYB_HMF domain-containing protein.
    
 0.993
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 
 0.935
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.932
NFYA
Nuclear transcription factor Y subunit alpha.
    
 0.931
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 
 0.848
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
    
 
 0.844
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 
 0.698
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 
 0.638
MYBBP1A
MYB binding protein 1a.
      
 0.611
RSF1
Remodeling and spacing factor 1.
      
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.