STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1A2Solute carrier organic anion transporter family member. (670 aa)    
Predicted Functional Partners:
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
      
 0.749
INO80D
INO80 complex subunit D.
      
 0.611
COMMD8
COMM domain containing 8.
      
 0.610
RECQL
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
      
 0.610
HACL1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
   
  
 0.602
CEP78
Centrosomal protein 78.
   
  
 0.602
TIPRL
TOR signaling pathway regulator.
      
 0.587
AFF2
AF4/FMR2 family member 2.
      
 0.586
HACD3
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
      
 0.545
PELI2
Pellino E3 ubiquitin protein ligase family member 2.
      
 0.532
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.