STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTN1Actinin alpha 1. (914 aa)    
Predicted Functional Partners:
VCL
Vinculin.
   
 0.978
ACTB-2
Uncharacterized protein.
   
 0.968
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
     
 0.935
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.932
ITGB4
Integrin beta.
    
 0.932
ZYX
Zyxin.
   
 0.929
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
 0.929
CTNNA2
Uncharacterized protein.
   
 0.924
CTNNA3-2
Uncharacterized protein.
   
 0.924
CTNNA1
Catenin alpha 1.
   
 0.924
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.