STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARHSP1Calcium regulated heat stable protein 1. (202 aa)    
Predicted Functional Partners:
CDIP1
Cell death inducing p53 target 1.
      
 0.603
RCBTB1
RCC1 and BTB domain containing protein 1.
      
 0.586
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
    
 0.527
POLR2F
RNA polymerase II subunit F.
   
 
 0.526
AMDHD2
Uncharacterized protein.
      
 0.524
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.507
COPS7A
COP9 signalosome subunit 7A.
      
 0.487
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.486
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
    
  0.482
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
   
 0.481
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.