STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINE3Serpin family E member 3; Belongs to the serpin family. (698 aa)    
Predicted Functional Partners:
INTS6
Integrator complex subunit 6.
      
 0.748
HABP2
Hyaluronan binding protein 2.
   
 0.708
WDFY2
WD repeat and FYVE domain containing 2.
 
  
 
 0.638
PDCD10
Programmed cell death 10.
 
 
  
 0.616
HGFAC
HGF activator.
   
 0.611
SERPING1
Serpin family G member 1; Belongs to the serpin family.
  
 
   0.540
TRIM13
Tripartite motif containing 13.
      
 0.532
U3J400_ANAPP
Uncharacterized protein.
   
    0.508
FAM167B
Family with sequence similarity 167 member B.
      
 0.489
BRWD3
Bromodomain and WD repeat domain containing 3.
    
 
 0.482
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.