STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2CD3C2 domain containing 3 centriole elongation regulator. (2344 aa)    
Predicted Functional Partners:
IFT88
Intraflagellar transport 88.
    
 
 0.718
KIAA0586
KIAA0586.
      
 0.691
OFD1
OFD1 centriole and centriolar satellite protein.
    
 0.665
LRRC45
Leucine rich repeat containing 45.
     
 0.629
SCLT1
Sodium channel and clathrin linker 1.
    
 0.624
TCTN3
Tectonic family member 3.
      
 0.611
DDX59
DEAD-box helicase 59.
      
 0.611
IFT172
Intraflagellar transport 172.
      
 0.610
B9D1
B9 domain containing 1.
      
 0.601
CEP126
Centrosomal protein 126.
      
 0.599
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.