Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX23 | EFTUD2 | ENSAPLP00000020704 | ENSAPLP00000024550 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Elongation factor Tu GTP binding domain containing 2. | 0.995 |
DDX23 | PRPF6 | ENSAPLP00000020704 | ENSAPLP00000021218 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Pre-mRNA processing factor 6. | 0.995 |
DDX23 | PRPF8 | ENSAPLP00000020704 | ENSAPLP00000010131 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Pre-mRNA processing factor 8. | 0.998 |
DDX23 | SNRNP200 | ENSAPLP00000020704 | ENSAPLP00000004009 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein U5 subunit 200. | 0.989 |
DDX23 | SNRNP40 | ENSAPLP00000020704 | ENSAPLP00000030891 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein U5 subunit 40. | 0.990 |
DDX23 | SNRPD1 | ENSAPLP00000020704 | ENSAPLP00000012020 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.970 |
DDX23 | SNRPD3 | ENSAPLP00000020704 | ENSAPLP00000008346 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D3. | 0.968 |
DDX23 | SNRPF | ENSAPLP00000020704 | ENSAPLP00000025809 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein polypeptide F. | 0.964 |
DDX23 | SNRPG | ENSAPLP00000020704 | ENSAPLP00000003436 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein polypeptide G. | 0.969 |
DDX23 | TXNL4A | ENSAPLP00000020704 | ENSAPLP00000015173 | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.989 |
EFTUD2 | DDX23 | ENSAPLP00000024550 | ENSAPLP00000020704 | Elongation factor Tu GTP binding domain containing 2. | DEAD-box helicase 23; Belongs to the DEAD box helicase family. | 0.995 |
EFTUD2 | PRPF6 | ENSAPLP00000024550 | ENSAPLP00000021218 | Elongation factor Tu GTP binding domain containing 2. | Pre-mRNA processing factor 6. | 0.998 |
EFTUD2 | PRPF8 | ENSAPLP00000024550 | ENSAPLP00000010131 | Elongation factor Tu GTP binding domain containing 2. | Pre-mRNA processing factor 8. | 0.999 |
EFTUD2 | SNRNP200 | ENSAPLP00000024550 | ENSAPLP00000004009 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein U5 subunit 200. | 0.997 |
EFTUD2 | SNRNP40 | ENSAPLP00000024550 | ENSAPLP00000030891 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein U5 subunit 40. | 0.997 |
EFTUD2 | SNRPD1 | ENSAPLP00000024550 | ENSAPLP00000012020 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.993 |
EFTUD2 | SNRPD3 | ENSAPLP00000024550 | ENSAPLP00000008346 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein Sm D3. | 0.990 |
EFTUD2 | SNRPF | ENSAPLP00000024550 | ENSAPLP00000025809 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein polypeptide F. | 0.992 |
EFTUD2 | SNRPG | ENSAPLP00000024550 | ENSAPLP00000003436 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein polypeptide G. | 0.989 |
EFTUD2 | TXNL4A | ENSAPLP00000024550 | ENSAPLP00000015173 | Elongation factor Tu GTP binding domain containing 2. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.988 |
page 1 of 6