STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL3LHFPL tetraspan subfamily member 3. (66 aa)    
Predicted Functional Partners:
CIB2
Uncharacterized protein.
   
 
 0.569
PCDH15
Protocadherin related 15.
   
 0.511
ENSAPLP00000020004
GLUCAGON domain-containing protein.
   
 0.511
CDHR5
Uncharacterized protein.
   
 0.511
TMIE
Uncharacterized protein.
     
 0.461
TMC3
Transmembrane channel-like protein.
   
 
 0.458
ENSAPLP00000020316
Uncharacterized protein.
   
 
 0.458
MPPED1
Metallophosphoesterase domain containing 1.
      
 0.433
CIB3
Calcium and integrin binding family member 3.
   
 
 0.412
CIB1
Calcium and integrin binding 1.
   
 
 0.412
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.