STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLX4IPSLX4 interacting protein. (475 aa)    
Predicted Functional Partners:
SLX4
SLX4 structure-specific endonuclease subunit.
    
 
 0.698
RTEL1
HELICc2 domain-containing protein.
      
 0.635
MSH3
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.622
RMI1
RecQ mediated genome instability 1.
   
  
 0.612
FANCD2
Uncharacterized protein.
      
 0.610
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
      
 0.555
RAD54L2
RAD54 like 2.
      
 0.515
EME1
Essential meiotic structure-specific endonuclease 1.
      
 0.482
PLK1
Serine/threonine-protein kinase PLK.
   
 
 0.473
TERF2IP
TERF2 interacting protein.
    
 
 0.470
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.