STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB4Ankyrin repeat and SOCS box containing 4. (435 aa)    
Predicted Functional Partners:
COMMD1
Copper metabolism domain containing 1.
    
 0.650
CLUAP1
Clusterin associated protein 1.
    
 0.620
SGCE
Sarcoglycan epsilon.
   
  
 0.619
IGDCC3
Immunoglobulin superfamily DCC subclass member 3.
     
 0.612
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.610
BCDIN3D
BCDIN3 domain containing RNA methyltransferase.
      
 0.602
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.601
ZNF704
Zinc finger protein 704.
    
 0.588
CASD1
CAS1 domain containing 1.
      
 0.586
ARIH1
RBR-type E3 ubiquitin transferase.
     
 0.571
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.