STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTULINLOTU deubiquitinase with linear linkage specificity like. (429 aa)    
Predicted Functional Partners:
C3orf14
Chromosome 3 open reading frame 14.
      
 0.748
TTC1
Tetratricopeptide repeat domain 1.
      
 0.747
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.703
RPS27A
Ubiquitin-like domain-containing protein.
    
  0.701
CHIC1
Cysteine rich hydrophobic domain 1.
      
 0.636
GNL3
G protein nucleolar 3.
    
 
 0.632
RTN4IP1
Reticulon 4 interacting protein 1.
      
 0.625
MRPL50
Mitochondrial ribosomal protein L50.
      
 0.623
RNF34
Ring finger protein 34.
      
 0.611
U3IHC3_ANAPP
Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.
      
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.