STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOWAHCSosondowah ankyrin repeat domain family member C. (419 aa)    
Predicted Functional Partners:
ZBTB33
Zinc finger and BTB domain containing 33.
    
 0.767
NKAP
NFKB activating protein.
    
 
 0.751
NKRF
NFKB repressing factor.
    
 0.648
ENSAPLP00000023067
XRN2-binding (XTBD) domain-containing protein.
    
 0.648
ANLN
Anillin actin binding protein.
    
 0.544
RNASEH2B
Ribonuclease H2 subunit B.
      
 0.471
CDK3
Cyclin dependent kinase 3; Belongs to the protein kinase superfamily.
    
 0.455
RHOF
Ras homolog family member F, filopodia associated.
    
  0.449
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
  0.414
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.