STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNT2Cyclin T2; Belongs to the cyclin family. (748 aa)    
Predicted Functional Partners:
CDK9
Cyclin dependent kinase 9.
   
 0.998
AFF4
AF4/FMR2 family member 4.
   
 0.923
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
     
 0.873
AFF1
AF4/FMR2 family member 1.
   
 0.868
CDK13
Cyclin dependent kinase 13.
   
 0.861
CCNH
Cyclin H; Belongs to the cyclin family.
     
 0.843
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 0.808
CDK12
Cyclin dependent kinase 12; Belongs to the protein kinase superfamily.
   
 0.792
SUPT4H1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.784
LARP7
La ribonucleoprotein domain family member 7.
   
 0.763
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.