STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRXN1Neurexin 1. (1503 aa)    
Predicted Functional Partners:
NLGN4X
COesterase domain-containing protein.
    
 0.999
NLGN3
Neuroligin 3.
    
 0.999
NLGN1
Neuroligin 1.
    
 0.993
NRXN3
Uncharacterized protein.
  
  
0.921
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
   
 0.862
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.857
LRRTM1
Leucine rich repeat transmembrane neuronal 1.
   
 0.770
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
   
 0.720
LRRTM3
Leucine rich repeat transmembrane neuronal 3.
   
 0.716
SLITRK3
SLIT and NTRK like family member 3.
   
 0.658
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.