STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC3Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (181 aa)    
Predicted Functional Partners:
TRAPPC5
Trafficking protein particle complex 5.
   
 0.992
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.991
TRAPPC10
Foie-gras_1 domain-containing protein.
    
 0.990
TRAPPC2B
Trafficking protein particle complex 2B.
    
 0.989
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.986
TRAPPC2L
Trafficking protein particle complex 2 like.
    
 0.985
TRAPPC9
Trafficking protein particle complex 9.
    
 0.982
TRAPPC11
Trafficking protein particle complex 11.
    
 0.968
TRAPPC8
Trafficking protein particle complex 8.
    
 0.967
RAB1A
RAB1A, member RAS oncogene family.
   
 0.948
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.