STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000021323Ion_trans_2 domain-containing protein. (318 aa)    
Predicted Functional Partners:
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
    
 0.783
C3orf67
Chromosome 3 open reading frame 67.
      
 0.620
U3IZ50_ANAPP
Cyclic nucleotide-binding domain-containing protein.
    
 
 0.597
ENSAPLP00000022448
Phosphatase and actin regulator.
      
 0.591
KCNMB1
Potassium calcium-activated channel subfamily M regulatory beta subunit 1.
    
 0.563
CDH22
Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.482
KCNA4
Potassium voltage-gated channel subfamily A member 4; Belongs to the potassium channel family.
   
  
 0.463
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.