STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC16AC-type lectin domain containing 16A. (1046 aa)    
Predicted Functional Partners:
DEXI
Dexi homolog.
      
 0.748
THNSL2
Threonine synthase like 2.
      
 0.697
VPS33B
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.651
VPS39
VPS39 subunit of HOPS complex.
   
  
 0.635
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
    
 
 0.629
SH3GL3
SH3 domain containing GRB2 like 3, endophilin A3.
      
 0.610
TXNDC11
Thioredoxin domain-containing protein.
      
 0.609
ENSAPLP00000026602
Uncharacterized protein.
      
 0.609
LGALS3
Galectin.
      
 0.609
WDR44
WD repeat domain 44.
      
 0.590
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.