STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNF8SNF8 subunit of ESCRT-II. (223 aa)    
Predicted Functional Partners:
VPS36
Vacuolar protein sorting 36 homolog.
   
 0.998
VPS25
Uncharacterized protein.
   
 0.998
C17orf75
Chromosome 17 open reading frame 75.
    
 0.938
ENSAPLP00000018770
Uncharacterized protein.
    
 0.938
CHMP4B
Charged multivesicular body protein 4B.
    
 0.921
U3HZV8_ANAPP
Uncharacterized protein.
    
 0.900
ENSAPLP00000017876
Uncharacterized protein.
   
 0.887
UEVLD
Uncharacterized protein.
   
 0.884
VPS37C
VPS37C subunit of ESCRT-I.
     
 0.884
CHMP4C
Charged multivesicular body protein 4C.
    
 0.882
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.