STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000021527zf-3CxxC domain-containing protein. (213 aa)    
Predicted Functional Partners:
USP18
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.616
RNF213
Ring finger protein 213.
   
  
 0.577
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.501
REEP2
Receptor expression-enhancing protein.
     
 0.500
IRF7
Interferon regulatory factor 7.
   
  
 0.494
DDX58
DExD/H-box helicase 58.
   
  
 0.488
GNG13
G protein subunit gamma 13.
      
 0.487
DHX58
DExH-box helicase 58.
   
  
 0.476
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.467
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.461
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.