STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL11BBAF chromatin remodeling complex subunit BCL11B. (822 aa)    
Predicted Functional Partners:
BCL11A
BAF chromatin remodeling complex subunit BCL11A.
  
0.671
SATB2
DNA-binding protein SATB.
   
 0.621
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.557
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.557
ACTL6A
Actin like 6A; Belongs to the actin family.
   
 0.539
ARID2
AT-rich interaction domain 2.
     
 0.522
BATF
Basic leucine zipper ATF-like transcription factor.
    
 0.518
SS18L1
Uncharacterized protein.
    
 
 0.495
GATA3
GATA binding protein 3.
    
 0.491
NR2F1
Nuclear receptor subfamily 2 group F member 1.
    
 0.489
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.