STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM3Tropomyosin 3; Belongs to the tropomyosin family. (347 aa)    
Predicted Functional Partners:
TNNT3
Troponin T3, fast skeletal type.
   
 0.981
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
  
 
0.978
MYL1
Myosin light chain 1.
   
 0.823
TNNI1
Troponin I1, slow skeletal type.
   
 0.805
TNNT2
Troponin T2, cardiac type.
   
 0.756
TNNI2
Troponin I2, fast skeletal type.
   
 0.743
SMIM20
Small integral membrane protein 20.
   
 0.736
TMOD3
Tropomodulin 3.
   
 0.732
ACTB-2
Uncharacterized protein.
   
 0.726
TMOD2
Tropomodulin 2.
   
 0.715
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.