STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000021697Uncharacterized protein. (435 aa)    
Predicted Functional Partners:
ENSAPLP00000025742
Uncharacterized protein.
 
     0.945
ENSAPLP00000028933
Uncharacterized protein.
 
     0.943
ENSAPLP00000031673
KASH domain-containing protein.
 
     0.941
SYNE1
Uncharacterized protein.
 
     0.927
ENSAPLP00000019404
KASH domain-containing protein.
 
    
 0.896
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.791
CLMN
Calmin.
 
      0.561
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
 
  
 0.560
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.495
ENSAPLP00000024046
Uncharacterized protein.
 
    
 0.436
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.