STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC8Homeobox C8. (242 aa)    
Predicted Functional Partners:
PBX3
Homeobox domain-containing protein.
    
 0.593
PBX1
PBX homeobox 1.
    
 0.592
PBX4
PBX homeobox 4.
    
 0.572
ENSAPLP00000017053
Uncharacterized protein.
    
 0.572
LARP4
La ribonucleoprotein domain family member 4.
      
 0.550
ZNF367
Zinc finger protein 367.
    
 0.520
HOXB6
Homeobox B6.
   
 
0.495
ENSAPLP00000021455
BHLH domain-containing protein.
   
 
 0.483
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
0.475
EPHB2
EPH receptor B2.
    
 
 0.465
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.