STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS2Bardet-Biedl syndrome 2. (522 aa)    
Predicted Functional Partners:
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
  
 0.998
BBS4
Bardet-Biedl syndrome 4.
   
 0.998
BBS9
PHTB1_N domain-containing protein.
  
 0.978
ENSAPLP00000032116
PHTB1_C domain-containing protein.
   
 0.973
TTC8
Uncharacterized protein.
  
 0.965
ENSAPLP00000019065
TPR_REGION domain-containing protein.
  
 0.960
ENSAPLP00000026428
Uncharacterized protein.
   
 0.951
KLHL41
Kelch like family member 41.
    
 0.947
LZTFL1
Leucine zipper transcription factor like 1.
   
 0.930
KLHL40
Kelch like family member 40.
    
 0.889
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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