STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDC1YTH domain containing 1. (750 aa)    
Predicted Functional Partners:
NUDT21
Nudix hydrolase 21.
    
 
 0.861
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.856
CSTF1
Cleavage stimulation factor subunit 1.
    
 
 0.852
CSTF3
Cleavage stimulation factor subunit 3.
    
 
 0.845
WTAP
WT1 associated protein.
    
 
 0.763
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
 
 0.755
VIRMA
Vir like m6A methyltransferase associated.
      
 0.684
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.659
U3I670_ANAPP
RRM domain-containing protein.
      
 0.625
CPSF6
RRM domain-containing protein.
   
 
 0.624
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.