STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK5RAP3CDK5 regulatory subunit associated protein 3. (526 aa)    
Predicted Functional Partners:
ENSAPLP00000016691
Uncharacterized protein.
    
 
 0.916
UFL1
UFM1 specific ligase 1.
   
 
 0.914
UFSP2
UFM1 specific peptidase 2.
   
  
 0.641
UBA5
Ubiquitin like modifier activating enzyme 5.
      
 0.635
FKBP6
Peptidylprolyl isomerase.
    
   0.574
SNX11
Sorting nexin 11.
      
 0.495
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
    
 
 0.459
ENSAPLP00000017681
Uncharacterized protein.
      
 0.453
SRRM1
Serine and arginine repetitive matrix 1.
      
 0.444
TTLL6
Uncharacterized protein.
      
 0.443
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.