STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42SE2CDC42 small effector 2. (86 aa)    
Predicted Functional Partners:
LYRM7
LYR motif containing 7; Belongs to the complex I LYR family.
    
 
 0.684
HSPA5
Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.
  
 0.659
RIT2
Ras like without CAAX 2.
    
 0.640
DEPDC1B
DEP domain containing 1B.
   
  
 0.637
CDC42
Cell division cycle 42.
    
 0.623
CAPSL
Calcyphosine like.
     
 0.612
LMBRD2
LMBR1 domain containing 2.
      
 0.611
RAI2
Retinoic acid induced 2.
     
 0.611
SCML2
Scm polycomb group protein like 2.
   
  
 0.605
ENSAPLP00000017597
Uncharacterized protein.
      
 0.604
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.