STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WHRNWhirlin. (1043 aa)    
Predicted Functional Partners:
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.925
USH2A
Usherin.
    
 0.915
GPSM2
G protein signaling modulator 2.
    
 
 0.899
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.892
CIB2
Uncharacterized protein.
    
 
 0.837
MPP1
Membrane palmitoylated protein 1; Belongs to the MAGUK family.
    
 0.817
EPS8
Epidermal growth factor receptor pathway substrate 8.
     
 0.817
USH1G
USH1 protein network component sans.
    
 0.778
PCDH15
Protocadherin related 15.
    
 
 0.766
ENSAPLP00000020316
Uncharacterized protein.
    
 
 0.754
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.