Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSAPLP00000019478 | MRTO4 | ENSAPLP00000019478 | ENSAPLP00000013680 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.959 |
ENSAPLP00000019478 | NSA2 | ENSAPLP00000019478 | ENSAPLP00000022397 | Uncharacterized protein. | NSA2 ribosome biogenesis factor. | 0.984 |
ENSAPLP00000019478 | RPL21 | ENSAPLP00000019478 | ENSAPLP00000005222 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
ENSAPLP00000019478 | RPS6 | ENSAPLP00000019478 | ENSAPLP00000018457 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
ENSAPLP00000019478 | RSL24D1 | ENSAPLP00000019478 | ENSAPLP00000028536 | Uncharacterized protein. | Ribosomal L24 domain containing 1. | 0.678 |
GNL2 | GNL3 | ENSAPLP00000006163 | ENSAPLP00000004761 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | G protein nucleolar 3. | 0.998 |
GNL2 | MRTO4 | ENSAPLP00000006163 | ENSAPLP00000013680 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.969 |
GNL2 | NIFK | ENSAPLP00000006163 | ENSAPLP00000021066 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.977 |
GNL2 | NSA2 | ENSAPLP00000006163 | ENSAPLP00000022397 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | NSA2 ribosome biogenesis factor. | 0.992 |
GNL2 | PES1 | ENSAPLP00000006163 | ENSAPLP00000018892 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Pescadillo ribosomal biogenesis factor 1. | 0.990 |
GNL2 | RPF2 | ENSAPLP00000006163 | ENSAPLP00000008507 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosome production factor 2 homolog. | 0.989 |
GNL2 | RPL21 | ENSAPLP00000006163 | ENSAPLP00000005222 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Uncharacterized protein. | 0.806 |
GNL2 | RSL24D1 | ENSAPLP00000006163 | ENSAPLP00000028536 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal L24 domain containing 1. | 0.994 |
GNL3 | GNL2 | ENSAPLP00000004761 | ENSAPLP00000006163 | G protein nucleolar 3. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.998 |
GNL3 | MRTO4 | ENSAPLP00000004761 | ENSAPLP00000013680 | G protein nucleolar 3. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.993 |
GNL3 | NIFK | ENSAPLP00000004761 | ENSAPLP00000021066 | G protein nucleolar 3. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.997 |
GNL3 | NSA2 | ENSAPLP00000004761 | ENSAPLP00000022397 | G protein nucleolar 3. | NSA2 ribosome biogenesis factor. | 0.987 |
GNL3 | PES1 | ENSAPLP00000004761 | ENSAPLP00000018892 | G protein nucleolar 3. | Pescadillo ribosomal biogenesis factor 1. | 0.999 |
GNL3 | RPF2 | ENSAPLP00000004761 | ENSAPLP00000008507 | G protein nucleolar 3. | Ribosome production factor 2 homolog. | 0.990 |
GNL3 | RPL21 | ENSAPLP00000004761 | ENSAPLP00000005222 | G protein nucleolar 3. | Uncharacterized protein. | 0.802 |
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