STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3J7A8_ANAPPUncharacterized protein. (195 aa)    
Predicted Functional Partners:
C11orf54
Chromosome 11 open reading frame 54.
      
 0.887
HEPHL1
Hephaestin like 1; Belongs to the multicopper oxidase family.
 
 
  
 0.755
VSTM5
V-set and transmembrane domain containing 5.
      
 0.749
HEPH
Hephaestin; Belongs to the multicopper oxidase family.
 
 
  
 0.631
MED17
Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.624
GPR83
G protein-coupled receptor 83; Belongs to the G-protein coupled receptor 1 family.
      
 0.621
PANX1
Pannexin; Structural component of the gap junctions and the hemichannels.
      
 0.542
TNNI1
Troponin I1, slow skeletal type.
      
 0.532
GLYCTK
Glycerate kinase.
      
 0.433
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.