STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (349 aa)    
Predicted Functional Partners:
SRSF2
RRM domain-containing protein.
  
 0.747
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.747
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.719
SRSF1
Uncharacterized protein.
   
 0.707
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.669
PAIP1
Poly(A) binding protein interacting protein 1.
   
 0.659
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
  
 0.657
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.647
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.646
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.645
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.