STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC8BKelch domain containing 8B. (339 aa)    
Predicted Functional Partners:
TRAPPC6B
Trafficking protein particle complex 6B.
   
  
 0.750
SIPA1L2
Signal induced proliferation associated 1 like 2.
   
  
 0.750
SPATA48
Spermatogenesis associated 48.
      
 0.749
ENSAPLP00000031194
Uncharacterized protein.
      
 0.749
TOGARAM1
TOG domain-containing protein.
      
 0.748
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3; Belongs to the potassium channel family.
      
 0.747
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.747
VWC2
Von Willebrand factor C domain containing 2.
   
  
 0.624
TMEM43
Transmembrane protein 43.
      
 0.623
ENSAPLP00000019523
zf-C2H2_7 domain-containing protein.
      
 0.621
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.