STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1BPPM-type phosphatase domain-containing protein. (479 aa)    
Predicted Functional Partners:
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
   
 0.923
SLC3A1
Solute carrier family 3 member 1.
 
 
  
 0.645
GHRH
GLUCAGON domain-containing protein.
   
    0.640
TMEM68
Uncharacterized protein.
   
  
 0.618
ENSAPLP00000023897
Uncharacterized protein.
   
 0.613
ABHD17C
Abhydrolase domain containing 17C.
      
 0.611
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.609
SMAD4
Mothers against decapentaplegic homolog.
    
 0.605
PPM1A
Protein phosphatase, Mg2+/Mn2+ dependent 1A.
  
  
0.599
ARIH1
RBR-type E3 ubiquitin transferase.
   
 
 0.590
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.