STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (655 aa)    
Predicted Functional Partners:
DDX42
Uncharacterized protein.
 
 
 
  0.896
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
  
 
0.888
DGCR8
DGCR8 microprocessor complex subunit.
    
 
 0.857
DROSHA
Drosha ribonuclease III.
   
 
 0.817
ESR1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.802
HTATSF1
HIV-1 Tat specific factor 1; Belongs to the G-protein coupled receptor 1 family.
   
 0.789
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.789
DHX15
DEAH-box helicase 15.
   
 0.774
SF3B1
Splicing factor 3b subunit 1.
   
 0.763
MTREX
Mtr4 exosome RNA helicase.
   
 0.747
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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