STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000022814Uncharacterized protein. (60 aa)    
Predicted Functional Partners:
PUS7L
Pseudouridine synthase 7 like.
   
  
 0.643
RPUSD2
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
      
 0.618
TRUB2
TruB pseudouridine synthase family member 2.
   
  
 0.618
ABITRAM
Actin binding transcription modulator.
    
   0.581
TCEA1
Transcription elongation factor A1.
     
 0.497
PUS7
Pseudouridine synthase 7.
   
  
 0.493
NOP10
NOP10 ribonucleoprotein.
     
 0.481
TRMT1L
tRNA methyltransferase 1 like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.467
PUS1
Pseudouridine synthase 1.
   
  
 0.443
RPUSD1
RNA pseudouridine synthase domain containing 1.
      
 0.441
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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