STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament associated protein 1 like 1. (756 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
      
 0.840
RPH3AL
Uncharacterized protein.
      
 0.838
U3IWR7_ANAPP
Uncharacterized protein.
      
 0.805
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.786
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.748
TBC1D8B
TBC1 domain family member 8B.
      
 0.748
CNTN6
Contactin 6.
      
 0.742
SYT10
Synaptotagmin 10.
      
 0.727
HS3ST4
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.705
CD99L2
CD99 molecule like 2.
      
 0.633
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.