STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM8PR/SET domain 8. (401 aa)    
Predicted Functional Partners:
BHLHE22
Basic helix-loop-helix family member e22.
   
  
 0.847
HS6ST1
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.716
CERS3
Ceramide synthase 3.
      
 0.658
ADAM12
ADAM metallopeptidase domain 12.
      
 0.633
U3I2H1_ANAPP
Uncharacterized protein.
      
 0.632
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
      
 0.631
VSX1
Visual system homeobox 1.
      
 0.603
BHLHE23
Basic helix-loop-helix family member e23.
      
 0.479
PRDM2
PR/SET domain 2.
      
0.477
RND2
Rho family GTPase 2.
     
 0.473
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.