STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPS7ACOP9 signalosome subunit 7A. (550 aa)    
Predicted Functional Partners:
COPS3
COP9 signalosome subunit 3.
    
 0.993
COPS4
COP9 signalosome subunit 4.
   
 0.993
COPS8
COP9 signalosome subunit 8.
    
 0.989
COPS2
COP9 signalosome subunit 2.
    
 0.988
COPS5
COP9 signalosome subunit 5.
    
 0.988
GPS1
G protein pathway suppressor 1.
   
 0.978
COPS7B
COP9 signalosome subunit 7B.
  
 
0.882
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
    
 0.861
DDB2
Damage specific DNA binding protein 2.
    
 0.792
RBX1
Ring-box 1.
   
 0.756
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.