STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4RReticulon 4 receptor. (486 aa)    
Predicted Functional Partners:
GP1BB
Glycoprotein Ib platelet subunit beta.
     
 0.911
RTN4
Reticulon.
    
 0.769
ENSAPLP00000024412
Death domain-containing protein.
    
 0.686
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 
0.655
ADGRL2
Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.
    
   0.624
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
    
   0.624
ENSAPLP00000026200
SUEL-type lectin domain-containing protein.
    
   0.624
ZDHHC8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.621
OMG
Oligodendrocyte myelin glycoprotein.
    
 
 0.615
ANPEP
Aminopeptidase.
    
 0.598
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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