STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000023001Uncharacterized protein. (476 aa)    
Predicted Functional Partners:
YIPF3
Yip1 domain family member 3.
      
 0.636
ENSAPLP00000027644
Uncharacterized protein.
      
 0.635
TMEM63C
Transmembrane protein 63C.
      
 0.634
DDX55
RNA helicase.
      
 0.621
TMED2
Transmembrane p24 trafficking protein 2.
      
 0.621
AP1G1
AP-1 complex subunit gamma.
      
 0.611
SLC25A3
Solute carrier family 25 member 3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.602
LIMCH1
LIM and calponin homology domains 1.
      
 0.599
ENSAPLP00000031255
NAC-A/B domain-containing protein.
     
 0.572
SORD
Sorbitol dehydrogenase.
      
 0.551
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.