STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000023047Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
ARMC7
Uncharacterized protein.
    
 
 0.806
SF3B3
Splicing factor 3b subunit 3.
    
   0.793
SF3B1
Splicing factor 3b subunit 1.
    
   0.781
TXNDC9
Thioredoxin domain containing 9.
    
 
 0.753
U3IYL3_ANAPP
Uncharacterized protein.
   
   0.726
PRPF8
Pre-mRNA processing factor 8.
    
   0.720
CDC5L
Cell division cycle 5 like.
    
   0.720
SF3B6
Splicing factor 3b subunit 6.
    
   0.644
CWC27
CWC27 spliceosome associated cyclophilin.
   
   0.547
LHFPL2
LHFPL tetraspan subfamily member 2.
      
 0.545
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.