STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX7Paired box 7. (502 aa)    
Predicted Functional Partners:
MYOD1
Myogenic factor.
   
 
 0.965
MYF5
Myogenic factor.
   
 
 0.960
MYF6
Myogenic factor 6.
   
 
 0.891
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.782
SHH
Sonic hedgehog signaling molecule.
      
 0.749
MSTN
Myostatin.
      
 0.741
BMP4
Bone morphogenetic protein 4.
      
 0.708
NKX2-2
Homeobox domain-containing protein.
    
 
 0.704
SOX10
SRY-box transcription factor 10.
   
 
 0.695
CD34
CD34 molecule.
   
  
 0.694
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.