STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RALGAPA1Ral GTPase activating protein catalytic alpha subunit 1. (2102 aa)    
Predicted Functional Partners:
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
   
0.698
ANP32A
LRRcap domain-containing protein.
      
 0.621
DCTN6
Dynactin subunit 6.
      
 0.611
ANAPC13
Uncharacterized protein.
      
 0.611
KBTBD2
Kelch repeat and BTB domain containing 2.
      
 0.611
DCAF6
DDB1 and CUL4 associated factor 6.
      
 0.611
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
      
 0.611
KLHL13
Kelch like family member 13.
      
 0.610
LRP3
LDL receptor related protein 3.
   
  
 0.587
FAM91A1
Family with sequence similarity 91 member A1.
     
 0.560
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.