STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGMOAlkylglycerol monooxygenase; Belongs to the sterol desaturase family. (448 aa)    
Predicted Functional Partners:
MEOX2
Mesenchyme homeobox 2.
 
    
 0.833
CPZ
Carboxypeptidase Z.
   
  
 0.740
USP6NL
USP6 N-terminal like.
    
 
 0.590
PTS
6-pyruvoyltetrahydropterin synthase.
      
 0.586
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
      
 0.548
CBR4
Carbonyl reductase 4.
      
 0.532
FA2H
Fatty acid 2-hydroxylase; Belongs to the sterol desaturase family.
   
  
 0.514
CRPPA
CDP-L-ribitol pyrophosphorylase A.
      
 0.471
KCNMA1
Uncharacterized protein.
      
 0.450
DPYD
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
   
  
 0.446
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.