STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEAF1DEAF1 transcription factor. (569 aa)    
Predicted Functional Partners:
HTR2C
5-hydroxytryptamine receptor 2C.
      
 0.768
TMEM80
Transmembrane protein 80.
      
 0.747
DRD4
Dopamine receptor D4; Belongs to the G-protein coupled receptor 1 family.
      
 0.657
PHRF1
PHD and ring finger domains 1.
   
  
 0.627
TTC12
TPR_REGION domain-containing protein.
      
 0.611
TALDO1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
      
 0.586
EPS8L2
EPS8 like 2.
      
 0.548
ZMYND11
Zinc finger MYND-type containing 11.
   
  
 0.500
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
      
 0.475
CLSTN2
Calsyntenin 2.
      
 0.447
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.