STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000023486Lactamase_B domain-containing protein. (102 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.974
WDR33
WD_REPEATS_REGION domain-containing protein.
   
 0.965
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.961
ENSAPLP00000024497
Fip1 domain-containing protein.
    
 0.930
CPSF4L
Cleavage and polyadenylation specific factor 4 like.
   
 0.925
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.925
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.923
CPSF3
Uncharacterized protein.
 
     0.921
PCF11
Uncharacterized protein.
   
 0.916
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.906
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.